Index

_

__call__() (toupy.registration.shift.ShiftFunc method), [1]

__iter__() (toupy.utils.funcutils.switch method), [1] (toupy.utils.funcutils.tqdm method), [1]

A

A (toupy.resolution.decorr.ImageDecorr attribute) add_mask() (toupy.restoration.GUI_tracker.PhaseTracker method), [1] align_horizontal() (toupy.registration.cone_registration.ConeBeamRegistration method) align_horizontal_from_parallel() (toupy.registration.cone_registration.ConeBeamRegistration method) align_vertical() (toupy.registration.cone_registration.ConeBeamRegistration method) align_vertical_cone() (toupy.registration.cone_registration.ConeBeamRegistration method) alignprojections_horizontal() (in module toupy.registration.registration), [1] alignprojections_vertical() (in module toupy.registration.registration), [1]

AmpTracker (class in toupy.restoration.GUI_tracker), [1] angles (toupy.tomo.geometry.ConeBeamGeometry attribute) animated_image() (in module toupy.utils.plot_utils), [1] apodization() (toupy.resolution.FSC.FourierShellCorr method), [1] apply_all_masks() (toupy.restoration.GUI_tracker.AmpTracker method), [1] (toupy.restoration.GUI_tracker.PhaseTracker method), [1] apply_mask() (toupy.restoration.GUI_tracker.AmpTracker method), [1] (toupy.restoration.GUI_tracker.PhaseTracker method), [1] autoscale_y() (in module toupy.utils.plot_utils), [1]

B

backprojector() (in module toupy.tomo.iradon), [1]

binlist() (in module toupy.io.h5chunk_shape_3D), [1]

C

calculate_derivatives() (in module toupy.restoration.derivativetools), [1] calculate_derivatives_fft() (in module toupy.restoration.derivativetools), [1] cart2pol() (in module toupy.restoration.vorticestools), [1] center_of_mass_stack() (in module toupy.registration.registration), [1] chambolle_pock_tv() (in module toupy.tomo.tv_recons) check_angles() (toupy.io.dataio.LoadProjections method), [1] check_angles_new() (toupy.io.dataio.LoadProjections method), [1] checkhostname() (in module toupy.utils.funcutils), [1] chooseregiontoderivatives() (in module toupy.restoration.derivativetools), [1] chooseregiontounwrap() (in module toupy.restoration.unwraptools), [1] chunk_shape_3D() (in module toupy.io.h5chunk_shape_3D), [1] circle() (toupy.resolution.FSC.FourierShellCorr method), [1] clear() (toupy.utils.funcutils.tqdm method), [1] close() (toupy.utils.funcutils.tqdm method), [1] cmvmax() (toupy.restoration.GUI_tracker.PhaseTracker method), [1] cmvmin() (toupy.restoration.GUI_tracker.PhaseTracker method), [1] compute_2tomograms() (in module toupy.resolution.FSCtools), [1] compute_2tomograms_splitted() (in module toupy.resolution.FSCtools), [1] compute_aligned_horizontal() (in module toupy.registration.registration), [1] compute_aligned_sino() (in module toupy.registration.registration), [1] compute_aligned_stack() (in module toupy.registration.registration), [1] compute_angle_weights() (in module toupy.tomo.iradon), [1]

compute_filter() (in module toupy.tomo.iradon), [1] cone_project() (in module toupy.tomo.cone_projector) ConeBeamGeometry (class in toupy.tomo.geometry) ConeBeamRegistration (class in toupy.registration.cone_registration) convert16bitstiff() (in module toupy.io.filesrw), [1] convert8bitstiff() (in module toupy.io.filesrw), [1] convert_to_beta() (in module toupy.utils.converter_utils), [1] convert_to_delta() (in module toupy.utils.converter_utils), [1] convert_to_mu() (in module toupy.utils.converter_utils), [1] convert_to_rhoe() (in module toupy.utils.converter_utils), [1] convert_to_rhom() (in module toupy.utils.converter_utils), [1] convert_to_tiff() (toupy.io.dataio.SaveTomogram class method), [1] convertimageto16bits() (in module toupy.io.filesrw), [1] convertimageto8bits() (in module toupy.io.filesrw), [1] create_circle() (in module toupy.utils.array_utils), [1] create_mask_borders() (in module toupy.utils.array_utils), [1] create_paramsh5() (in module toupy.io.filesrw), [1] crop() (in module toupy.utils.array_utils), [1] crop_array() (in module toupy.io.filesrw), [1] cropROI() (in module toupy.utils.array_utils), [1] ctf_retrieve() (in module toupy.restoration.phase_retrieval) cutoff_shell (toupy.resolution.FSC.RandomFSC attribute), [1]

D

d (toupy.resolution.decorr.ImageDecorr attribute) datafilewcard() (toupy.io.dataio.PathName method), [1] deprecated() (in module toupy.utils.funcutils), [1] derivatives() (in module toupy.restoration.derivativetools), [1] derivatives_fft() (in module toupy.restoration.derivativetools), [1] derivatives_sino() (in module toupy.restoration.derivativetools), [1] det_pixel_size (toupy.tomo.geometry.ConeBeamGeometry attribute)

display() (toupy.utils.funcutils.tqdm method), [1] display_slice() (in module toupy.utils.plot_utils), [1] distance() (in module toupy.restoration.unwraptools), [1] down() (toupy.restoration.GUI_tracker.PhaseTracker method), [1] downloadURL() (in module toupy.utils.funcutils), [1] downloadURLfile() (in module toupy.utils.funcutils), [1] draw_mask() (toupy.restoration.GUI_tracker.PhaseTracker method), [1]

E

effective_pixel_size (toupy.tomo.geometry.ConeBeamGeometry attribute) (toupy.tomo.geometry.ConeBeamGeometry property) estimate_cor() (toupy.registration.cone_registration.ConeBeamRegistration method)

estimate_geometry() (toupy.registration.cone_registration.ConeBeamRegistration method) estimate_rot_axis() (in module toupy.registration.registration), [1] external_write_mode() (toupy.utils.funcutils.tqdm class method), [1]

F

f (toupy.resolution.FSC.RandomFSC attribute), [1] (toupy.resolution.FSC.SSNRPlot attribute), [1] f10 (toupy.resolution.MTF.MTFEstimator attribute) f50 (toupy.resolution.MTF.MTFEstimator attribute) fastfftn() (in module toupy.utils.FFT_utils), [1] fastifftn() (in module toupy.utils.FFT_utils), [1] fdk_backproject() (in module toupy.tomo.fdk) fdk_filter() (in module toupy.tomo.fdk) fdk_reconstruct() (in module toupy.tomo.fdk) fdk_tomo_recons() (in module toupy.tomo.tomorecons), [1] fdk_weight() (in module toupy.tomo.fdk) fn_res (toupy.resolution.FSC.FSCPlot attribute), [1] (toupy.resolution.FSC.SSNRPlot attribute), [1] fn_res_cpx (toupy.resolution.FSC.FSCPlot attribute), [1] (toupy.resolution.FSC.SSNRPlot attribute), [1] fnyquist (toupy.resolution.FSC.RandomFSC attribute), [1] (toupy.resolution.FSC.SSNRPlot attribute), [1] format_dict (toupy.utils.funcutils.tqdm property), [1]

format_interval() (toupy.utils.funcutils.tqdm static method), [1] format_meter() (toupy.utils.funcutils.tqdm static method), [1] format_num() (toupy.utils.funcutils.tqdm static method), [1] format_sizeof() (toupy.utils.funcutils.tqdm static method), [1] fouriercorr() (toupy.resolution.FSC.FourierShellCorr method), [1] FourierShellCorr (class in toupy.resolution.FSC), [1] fract_hanning() (in module toupy.utils.array_utils), [1] fract_hanning_pad() (in module toupy.utils.array_utils), [1] FRCPlot (class in toupy.resolution.FSC), [1] freq (toupy.resolution.MTF.MTFEstimator attribute) freq_bands (toupy.resolution.localres.LocalResolution attribute) freq_phys (toupy.resolution.MTF.MTFEstimator attribute) FSC (toupy.resolution.FSC.SSNRPlot attribute), [1] FSC_corr (toupy.resolution.FSC.RandomFSC attribute), [1] FSC_obs (toupy.resolution.FSC.RandomFSC attribute), [1] FSC_rand (toupy.resolution.FSC.RandomFSC attribute), [1] FSCPlot (class in toupy.resolution.FSC), [1] full_tomo_recons() (in module toupy.tomo.tomorecons), [1]

G

gauss_kern() (in module toupy.utils.array_utils), [1] geometry (toupy.registration.cone_registration.ConeBeamRegistration attribute) get_charge() (in module toupy.restoration.unwraptools), [1] get_lock() (toupy.utils.funcutils.tqdm class method), [1]

get_object_novort() (in module toupy.restoration.vorticestools), [1] get_probe_novort() (in module toupy.restoration.vorticestools), [1] gradient_axis() (in module toupy.restoration.derivativetools), [1] gui_plotamp() (in module toupy.restoration.GUI_tracker), [1] gui_plotphase() (in module toupy.restoration.GUI_tracker), [1]

H

hanning_apod1D() (in module toupy.utils.array_utils), [1]

hanning_apodization() (in module toupy.utils.array_utils), [1]

I

ImageDecorr (class in toupy.resolution.decorr) insert_missing() (toupy.io.dataio.LoadProjections static method), [1] is_power2() (in module toupy.utils.FFT_utils), [1]

isnotebook() (in module toupy.utils.plot_utils), [1] iterative_phase_retrieval() (in module toupy.restoration.phase_retrieval) iterative_show() (in module toupy.utils.plot_utils), [1]

K

key_event() (toupy.restoration.GUI_tracker.PhaseTracker method), [1]

L

load() (toupy.io.dataio.LoadData class method), [1] (toupy.io.dataio.LoadProjections class method), [1] (toupy.io.dataio.LoadTomogram class method), [1] load_masks() (toupy.restoration.GUI_tracker.PhaseTracker method), [1] load_olddata() (toupy.io.dataio.LoadData class method), [1] load_paramsh5() (in module toupy.io.filesrw), [1] LoadData (class in toupy.io.dataio), [1]

loadedf() (toupy.io.dataio.LoadProjections class method), [1] loadmasks() (toupy.io.dataio.LoadData class method), [1] LoadProjections (class in toupy.io.dataio), [1] loadshiftstack() (toupy.io.dataio.LoadData class method), [1] loadtheta() (toupy.io.dataio.LoadData class method), [1] LoadTomogram (class in toupy.io.dataio), [1] LocalFSC (class in toupy.resolution.FSC), [1] LocalResolution (class in toupy.resolution.localres)

M

magnification (toupy.tomo.geometry.ConeBeamGeometry attribute) (toupy.tomo.geometry.ConeBeamGeometry property) make_air_mask() (in module toupy.restoration.GUI_tracker), [1] mask (toupy.resolution.localres.LocalResolution attribute) mask_all() (toupy.restoration.GUI_tracker.PhaseTracker method), [1] mask_borders() (in module toupy.utils.array_utils), [1] match() (toupy.utils.funcutils.switch method), [1] memmap_volfile() (in module toupy.io.filesrw), [1] metadatafilewcard() (toupy.io.dataio.PathName method), [1] mod_iradon() (in module toupy.tomo.iradon), [1] mod_iradon_cuda() (in module toupy.tomo.iradon), [1] model_erf() (in module toupy.utils.fit_utils), [1] model_tanh() (in module toupy.utils.fit_utils), [1] module toupy, [1] toupy.io, [1] toupy.io.dataio, [1] toupy.io.filesrw, [1] toupy.io.h5chunk_shape_3D, [1] toupy.registration, [1] toupy.registration.cone_registration toupy.registration.registration, [1] toupy.registration.shift, [1] toupy.resolution, [1] toupy.resolution.decorr toupy.resolution.FSC, [1] toupy.resolution.FSCtools, [1] toupy.resolution.localres toupy.resolution.MTF toupy.restoration, [1] toupy.restoration.derivativetools, [1] toupy.restoration.GUI_tracker, [1] toupy.restoration.phase_retrieval toupy.restoration.ramptools, [1] toupy.restoration.ring_correction toupy.restoration.unwraptools, [1] toupy.restoration.vorticestools, [1] toupy.simulation, [1] toupy.simulation.phantom_creator, [1] toupy.tomo, [1] toupy.tomo.cone_projector toupy.tomo.fdk toupy.tomo.geometry toupy.tomo.iradon, [1] toupy.tomo.radon, [1] toupy.tomo.tomorecons, [1] toupy.tomo.tv_recons toupy.utils, [1] toupy.utils.array_utils, [1] toupy.utils.converter_utils, [1] toupy.utils.FFT_utils, [1] toupy.utils.fit_utils, [1] toupy.utils.funcutils, [1] toupy.utils.plot_utils, [1]

monitor (toupy.utils.funcutils.tqdm attribute), [1] monitor_interval (toupy.utils.funcutils.tqdm attribute), [1] moveto() (toupy.utils.funcutils.tqdm method), [1] MTF (toupy.resolution.MTF.MTFEstimator attribute) MTFEstimator (class in toupy.resolution.MTF)

N

n_u (toupy.tomo.geometry.ConeBeamGeometry attribute) n_v (toupy.tomo.geometry.ConeBeamGeometry attribute) nextpow2() (in module toupy.utils.FFT_utils), [1] nextpoweroftwo() (in module toupy.utils.FFT_utils), [1]

normalize_array() (in module toupy.utils.array_utils), [1] normalize_projections_phase() (in module toupy.restoration.ramptools), [1] numVals() (in module toupy.io.h5chunk_shape_3D), [1] nyquist() (toupy.resolution.FSC.FourierShellCorr method), [1]

O

onclose() (toupy.restoration.GUI_tracker.PhaseTracker method), [1]

oneslicefordisplay() (in module toupy.registration.registration), [1] onscroll() (toupy.restoration.GUI_tracker.PhaseTracker method), [1]

P

padarray_bothsides() (in module toupy.utils.array_utils), [1] padfft() (in module toupy.utils.FFT_utils), [1] padrightside() (in module toupy.utils.FFT_utils), [1] padwidthbothsides() (in module toupy.utils.FFT_utils), [1] pandas() (toupy.utils.funcutils.tqdm class method), [1] PathName (class in toupy.io.dataio), [1] perturbShape() (in module toupy.io.h5chunk_shape_3D), [1] phantom() (in module toupy.simulation.phantom_creator), [1] phantom3d() (in module toupy.simulation.phantom_creator), [1] phaseresidues() (in module toupy.restoration.unwraptools), [1] phaseresiduesStack() (in module toupy.restoration.unwraptools), [1] phaseresiduesStack_parallel() (in module toupy.restoration.unwraptools), [1] PhaseTracker (class in toupy.restoration.GUI_tracker), [1] play() (toupy.restoration.GUI_tracker.PhaseTracker method), [1] plot() (toupy.resolution.decorr.ImageDecorr method) (toupy.resolution.FSC.FRCPlot method), [1] (toupy.resolution.FSC.FSCPlot method), [1] (toupy.resolution.FSC.LocalFSC method), [1] (toupy.resolution.FSC.RandomFSC method), [1] (toupy.resolution.FSC.SSNRPlot method), [1] (toupy.resolution.localres.LocalResolution method) (toupy.resolution.MTF.MTFEstimator method)

plot_checkangles() (in module toupy.utils.plot_utils), [1] plotshorizontal() (toupy.utils.plot_utils.RegisterPlot method), [1] plotsvertical() (toupy.utils.plot_utils.RegisterPlot method), [1] pol2cart() (in module toupy.restoration.vorticestools), [1] polynomial1d() (in module toupy.utils.array_utils), [1] probe2HSV() (toupy.utils.plot_utils.ShowProjections static method), [1] progress_bar() (in module toupy.utils.funcutils), [1] projector() (in module toupy.tomo.radon), [1] projectpoly1d() (in module toupy.utils.array_utils), [1]

R

r_res (toupy.resolution.decorr.ImageDecorr attribute) r_values (toupy.resolution.decorr.ImageDecorr attribute) radon_cuda() (in module toupy.tomo.radon), [1] radtap() (in module toupy.utils.array_utils), [1] RandomFSC (class in toupy.resolution.FSC), [1] read_cxi() (in module toupy.io.filesrw), [1] read_edf() (in module toupy.io.filesrw), [1] read_ptyr() (in module toupy.io.filesrw), [1] read_recon() (in module toupy.io.filesrw), [1] read_theta_raw() (in module toupy.io.filesrw), [1] read_theta_recon() (in module toupy.io.filesrw), [1] read_tiff() (in module toupy.io.filesrw), [1] read_tiff_info() (in module toupy.io.filesrw), [1] read_volfile() (in module toupy.io.filesrw), [1] rebin_fan_to_parallel() (in module toupy.registration.cone_registration) rebin_to_parallel() (toupy.registration.cone_registration.ConeBeamRegistration method) reconsSART() (in module toupy.tomo.iradon), [1] refine_horizontalalignment() (in module toupy.registration.registration), [1] refresh() (toupy.utils.funcutils.tqdm method), [1] register_2Darrays() (in module toupy.registration.registration), [1] RegisterPlot (class in toupy.utils.plot_utils), [1] remove_all_mask() (toupy.restoration.GUI_tracker.PhaseTracker method), [1] remove_extraprojs() (in module toupy.io.dataio), [1] remove_mask() (toupy.restoration.GUI_tracker.PhaseTracker method), [1] remove_ramp() (toupy.restoration.GUI_tracker.PhaseTracker method), [1] remove_rampall() (toupy.restoration.GUI_tracker.PhaseTracker method), [1] remove_rings_stack() (in module toupy.restoration.ring_correction) remove_rings_titarenko() (in module toupy.restoration.ring_correction) remove_rings_wavelet_fft() (in module toupy.restoration.ring_correction) replace_bad() (in module toupy.utils.array_utils), [1] reset() (toupy.utils.funcutils.tqdm method), [1] residuals_erf() (in module toupy.utils.fit_utils), [1] residuals_tanh() (in module toupy.utils.fit_utils), [1] resolution (toupy.resolution.decorr.ImageDecorr attribute) resolution_10 (toupy.resolution.MTF.MTFEstimator attribute) resolution_50 (toupy.resolution.MTF.MTFEstimator attribute) resolution_full (toupy.resolution.FSC.FSCPlot attribute), [1] (toupy.resolution.FSC.SSNRPlot attribute), [1]

resolution_half (toupy.resolution.FSC.FSCPlot attribute), [1] (toupy.resolution.FSC.SSNRPlot attribute), [1] resolution_map (toupy.resolution.FSC.LocalFSC attribute), [1] (toupy.resolution.localres.LocalResolution attribute) resolution_map_half (toupy.resolution.FSC.LocalFSC attribute), [1] (toupy.resolution.localres.LocalResolution attribute) resolution_map_phys (toupy.resolution.FSC.LocalFSC attribute), [1] (toupy.resolution.localres.LocalResolution attribute) resolution_map_phys_half (toupy.resolution.FSC.LocalFSC attribute), [1] (toupy.resolution.localres.LocalResolution attribute) resolution_mean (toupy.resolution.FSC.LocalFSC attribute), [1] (toupy.resolution.localres.LocalResolution attribute) resolution_mean_half (toupy.resolution.FSC.LocalFSC attribute), [1] (toupy.resolution.localres.LocalResolution attribute) resolution_median (toupy.resolution.FSC.LocalFSC attribute), [1] (toupy.resolution.localres.LocalResolution attribute) resolution_median_half (toupy.resolution.FSC.LocalFSC attribute), [1] (toupy.resolution.localres.LocalResolution attribute) resolution_px (toupy.resolution.decorr.ImageDecorr attribute) resolution_px_mean (toupy.resolution.decorr.ImageDecorr attribute) resolution_px_median (toupy.resolution.decorr.ImageDecorr attribute) resolution_px_std (toupy.resolution.decorr.ImageDecorr attribute) resolution_std (toupy.resolution.FSC.LocalFSC attribute), [1] (toupy.resolution.localres.LocalResolution attribute) resolution_std_half (toupy.resolution.FSC.LocalFSC attribute), [1] (toupy.resolution.localres.LocalResolution attribute) resolutions_px (toupy.resolution.decorr.ImageDecorr attribute) results_datapath() (toupy.io.dataio.PathName method), [1] results_folder() (toupy.io.dataio.PathName method), [1] ringthickness() (toupy.resolution.FSC.FourierShellCorr method), [1] rmair() (in module toupy.restoration.ramptools), [1] rmlinearphase() (in module toupy.restoration.ramptools), [1] rmphaseramp() (in module toupy.restoration.ramptools), [1] rmvortices_object() (in module toupy.restoration.vorticestools), [1] rmvortices_probe() (in module toupy.restoration.vorticestools), [1] round_to_even() (in module toupy.utils.array_utils), [1]

S

save() (toupy.io.dataio.SaveData class method), [1] (toupy.io.dataio.SaveTomogram class method), [1] save_masks() (toupy.restoration.GUI_tracker.PhaseTracker method), [1] save_vol_to_h5() (toupy.io.dataio.SaveTomogram class method), [1] savecheck() (toupy.io.dataio.SaveData method), [1] (toupy.io.dataio.SaveTomogram method), [1] SaveData (class in toupy.io.dataio), [1] saveFSC() (toupy.io.dataio.SaveData class method), [1] savemasks() (toupy.io.dataio.SaveData class method), [1] SaveTomogram (class in toupy.io.dataio), [1] SDD (toupy.tomo.geometry.ConeBeamGeometry attribute) search_projections() (toupy.io.dataio.PathName method), [1] set_description() (toupy.utils.funcutils.tqdm method), [1] set_description_str() (toupy.utils.funcutils.tqdm method), [1] set_lock() (toupy.utils.funcutils.tqdm class method), [1] set_postfix() (toupy.utils.funcutils.tqdm method), [1] set_postfix_str() (toupy.utils.funcutils.tqdm method), [1] sharpening_image() (in module toupy.utils.array_utils), [1] shift_fft() (toupy.registration.shift.ShiftFunc method), [1] shift_linear() (toupy.registration.shift.ShiftFunc method), [1] shift_spline_wrap() (toupy.registration.shift.ShiftFunc method), [1] ShiftFunc (class in toupy.registration.shift), [1] show_figure() (in module toupy.utils.plot_utils), [1]

show_fsc_curve() (in module toupy.utils.plot_utils), [1] show_fsc_images() (in module toupy.utils.plot_utils), [1] show_linearphase() (in module toupy.utils.plot_utils), [1] show_projections() (toupy.utils.plot_utils.ShowProjections method), [1] show_random_fsc_curve() (in module toupy.utils.plot_utils), [1] show_resolution_map() (in module toupy.utils.plot_utils), [1] show_ssnr_curve() (in module toupy.utils.plot_utils), [1] ShowProjections (class in toupy.utils.plot_utils), [1] sigma_noise (toupy.resolution.localres.LocalResolution attribute) smooth1d() (in module toupy.utils.array_utils), [1] smooth2d() (in module toupy.utils.array_utils), [1] smooth_image() (in module toupy.utils.array_utils), [1] SOD (toupy.tomo.geometry.ConeBeamGeometry attribute) sort_array() (in module toupy.utils.array_utils), [1] split_dataset() (in module toupy.resolution.FSCtools), [1] SSNR (toupy.resolution.FSC.SSNRPlot attribute), [1] ssnr() (toupy.resolution.FSC.FourierShellCorr method), [1] SSNR_T (toupy.resolution.FSC.SSNRPlot attribute), [1] SSNRPlot (class in toupy.resolution.FSC), [1] status_printer() (toupy.utils.funcutils.tqdm static method), [1] stop_play() (toupy.restoration.GUI_tracker.PhaseTracker method), [1] submit() (toupy.restoration.GUI_tracker.PhaseTracker method), [1] suggest_holo_distances() (in module toupy.restoration.phase_retrieval) switch (class in toupy.utils.funcutils), [1]

T

T (toupy.resolution.FSC.RandomFSC attribute), [1] tie_hom() (in module toupy.restoration.phase_retrieval) tiff_folderpath() (toupy.io.dataio.SaveTomogram method), [1] tomo_recons() (in module toupy.tomo.tomorecons), [1] tomoconsistency_multiple() (in module toupy.registration.registration), [1] toupy module, [1] toupy.io module, [1] toupy.io.dataio module, [1] toupy.io.filesrw module, [1] toupy.io.h5chunk_shape_3D module, [1] toupy.registration module, [1] toupy.registration.cone_registration module toupy.registration.registration module, [1] toupy.registration.shift module, [1] toupy.resolution module, [1] toupy.resolution.decorr module toupy.resolution.FSC module, [1] toupy.resolution.FSCtools module, [1] toupy.resolution.localres module toupy.resolution.MTF module toupy.restoration module, [1] toupy.restoration.derivativetools module, [1] toupy.restoration.GUI_tracker module, [1] toupy.restoration.phase_retrieval module toupy.restoration.ramptools module, [1]

toupy.restoration.ring_correction module toupy.restoration.unwraptools module, [1] toupy.restoration.vorticestools module, [1] toupy.simulation module, [1] toupy.simulation.phantom_creator module, [1] toupy.tomo module, [1] toupy.tomo.cone_projector module toupy.tomo.fdk module toupy.tomo.geometry module toupy.tomo.iradon module, [1] toupy.tomo.radon module, [1] toupy.tomo.tomorecons module, [1] toupy.tomo.tv_recons module toupy.utils module, [1] toupy.utils.array_utils module, [1] toupy.utils.converter_utils module, [1] toupy.utils.FFT_utils module, [1] toupy.utils.fit_utils module, [1] toupy.utils.funcutils module, [1] toupy.utils.plot_utils module, [1] tqdm (class in toupy.utils.funcutils), [1] transverse_apodization() (toupy.resolution.FSC.FourierShellCorr method), [1] tv_reconstruction() (in module toupy.tomo.tv_recons)

U

u_coords() (toupy.tomo.geometry.ConeBeamGeometry method) unpause() (toupy.utils.funcutils.tqdm method), [1] unwrap_phase_2d() (in module toupy.restoration.unwraptools), [1] unwrapping_all() (toupy.restoration.GUI_tracker.PhaseTracker method), [1] unwrapping_phase() (in module toupy.restoration.unwraptools), [1] (toupy.restoration.GUI_tracker.PhaseTracker method), [1]

up() (toupy.restoration.GUI_tracker.PhaseTracker method), [1] update() (toupy.restoration.GUI_tracker.PhaseTracker method), [1] (toupy.utils.funcutils.tqdm method), [1] update_show() (toupy.utils.plot_utils.ShowProjections method), [1] updatehorizontal() (toupy.utils.plot_utils.RegisterPlot method), [1] updatevertical() (toupy.utils.plot_utils.RegisterPlot method), [1]

V

v_coords() (toupy.tomo.geometry.ConeBeamGeometry method) validate() (toupy.tomo.geometry.ConeBeamGeometry method)

vertical_fluctuations() (in module toupy.registration.registration), [1] vertical_shift() (in module toupy.registration.registration), [1]

W

wrap() (in module toupy.restoration.unwraptools), [1] wrapattr() (toupy.utils.funcutils.tqdm class method), [1] wraptopi() (in module toupy.restoration.unwraptools), [1] write() (toupy.utils.funcutils.tqdm class method), [1]

write_edf() (in module toupy.io.filesrw), [1] write_paramsh5() (in module toupy.io.filesrw), [1] write_tiff() (in module toupy.io.filesrw), [1] write_tiffmetadata() (in module toupy.io.filesrw), [1]