Welcome to toupy documentation¶
Toupy is a suite of tools for the processing of high-resolution tomography dataset compiled by J. C. da Silva and licensed under the GPLv3 license .
The name toupy stands for Tomographic Utilites for Python and it is a wordplay with the French word toupie for spinning top, the toy designed to spin rapidly on the ground, the motion of which causes it to remain precisely balanced on its tip due to its rotational inertia. Here you can find the wikipedia page in English and in French.
Toupy implements tools for preprocessing the projections before the tomographic reconstruction and the reconstruction itself. The pipeline and algorithms is briefly summarized in this publication 1, but which is also based on previous works 2.
Quicklinks¶
Get started quickly with the examples in the templates directory.
The complete documentation.
The source code can be obtained via Github repo of toupy .
References¶
- 1
da Silva, J. C., Haubrich, J., Requena, G., Hubert, M., Pacureanu, A., Bloch, L., Yang, Y., Cloetens, P., High energy near-and far-field ptychographic tomography at the ESRF. Proc. SPIE 10391, Developments in X-Ray Tomography XI, 1039106 (2017). doi
- 2
Guizar-Sicairos, M., Diaz, A., Holler, M., Lucas, M. S., Menzel, A., Wepf, R. A., and Bunk, O., Phase tomography from x-ray coherent diffractive imaging projections, Opt. Express 19, 21345–21357 (2011). doi
Acknowledgments¶
Ana Diaz, PSI, Switzerland
Andreas Menzel, PSI, Switzerland
Manuel Guizar-Sicairos, PSI, Switzerland
Pierre Paleo, ESRF, France
Peter Cloetens, ESRF, France